BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005F07SP1|AL425407
(886 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1758 1667 0.0
>3x_Contig1758
Length = 25930
Score = 1667 bits (834), Expect = 0.0
Identities = 870/887 (98%), Gaps = 2/887 (0%)
Strand = Plus / Plus
Query: 1 cagtnatgatgaggggtaaaaaaataacttataacttagagcaatgtaattcttctattg 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8281 cagtcatgatgaggggtaaaaaaataacttataacttagagcaatgtaattcttctattg 8340
Query: 61 attttccactacagccgttgtcagattgcgtgtagagctttcctagtgtcgttgtttgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8341 attttccactacagccgttgtcagattgcgtgtagagctttcctagtgtcgttgtttgtc 8400
Query: 121 ttgatactttattgatgttgatgtttacttgctagttagttattttaatgtttttcgaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8401 ttgatactttattgatgttgatgtttacttgctagttagttattttaatgtttttcgaat 8460
Query: 181 tttgtttccccctcaaagagcgacaaawtcgacagaattaaaagaaaacatataccaaar 240
||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||
Sbjct: 8461 tttgtttccccctcaaagagcgacaaattcgacagatttaagagaaaacatataccaaag 8520
Query: 241 arataaaattgcgttgggtattgaacctctatggttctgcaactggtgccaacagatatt 300
| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8521 agatagaattgcgttgggtattgaacctctatggttctgcaactggtgccaacagatatt 8580
Query: 301 ttatagtgtatcattacagctttatcttttactatacatattatatgtgtatatgtgtat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8581 ttatagtgtatcattacagctttatcttttactatacatattatatgtgtatatgtgtat 8640
Query: 361 aattggtcaaaaacgttcgcatgactcaaataamagatggatcatatatgtgatgtgtcg 420
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 8641 aattggtcaaaaacgttcgcatgactcaaataaaagatggatcatatatgtgatgtgtcg 8700
Query: 421 aatctcaaacgamaacgaagattacmtccmcctattggcgttgcmtctcagtgagacgtt 480
|||||||||||| |||||||||||| ||| |||||||||||||| |||||||||||||||
Sbjct: 8701 aatctcaaacgaaaacgaagattacatccacctattggcgttgcatctcagtgagacgtt 8760
Query: 481 taagattggccaagttctccmggatctggccatctgagatcataattggggtttgcgtat 540
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 8761 taagattggccaagttctccaggatctggccatctgagatcataattggggtttgcgtat 8820
Query: 541 cgttgcggaagtaatcttctgcacttgtatgtgctaaaggtggacagagtctgaatgaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8821 cgttgcggaagtaatcttctgcacttgtatgtgctaaaggtggacagagtctgaatgaac 8880
Query: 601 cagaccgatccatttgatgttggaagggggaattttccgaatagaacgcag-tctattcg 659
||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 8881 cagaccgatccatttgatgttggaagggggaattttccgaatagaacgcagttcta-tcg 8939
Query: 660 agtttgactttgagatggttctgctgttcgtcgttcccgttcttttggtataggttctgt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8940 agtttgactttgagatggttctgctgttcgtcgttcccgttcttttggtataggttctgt 8999
Query: 720 agaagcggttgcggtggctgtattccagcctgaagcgatgatgactcgtggttcaatagg 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9000 agaagcggttgcggtggctgtattccagcctgaagcgatgatgactcgtggttcaatagg 9059
Query: 780 aargatacgttcatctgtttagagttccgctgcaaaagctgatccatttctgtgacgact 839
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9060 aaggatacgttcatctgtttagagttccgctgcaaaagctgatccatttctgtgacgact 9119
Query: 840 ttctgcaaatttgatgccaaggttgaccatgattctgcmtcgcttgg 886
|||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 9120 ttctgcaaatttgatgccaaggttgaccatgattctgcatcgcttgg 9166
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5507
Number of Sequences: 1807
Number of extensions: 5507
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 886
length of database: 10,358,551
effective HSP length: 16
effective length of query: 870
effective length of database: 10,329,639
effective search space: 8986785930
effective search space used: 8986785930
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)